abiview(1) Display the trace in an ABI sequencer file

SYNOPSIS

abiview -infile infile -outseq seqout -graph xygraph [-startbase integer] [-endbase integer] -separate boolean [-yticks boolean] [-sequence boolean] [-window integer] [-bases string]
abiview -help

DESCRIPTION

abiview

is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). It is part of the "Data retrieval:Sequence data,Display" command group(s).

OPTIONS

Input section

-infile infile

Output section

-outseq seqout

-graph xygraph

-startbase integer

-endbase integer

Last sequence base to report or display. If the default is set to zero then the value of this is taken as the maximum number of bases.

-separate boolean

Default value: N

-yticks boolean

Default value: N

-sequence boolean

Default value: Y

-window integer

Default value: 40

-bases string

Default value: GATC

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

AUTHOR

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

Wrote the script used to autogenerate this manual page.

COPYRIGHT


This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.