DESCRIPTION

usage: extractUnmappedSubreads.py [-h] [--verbose] [--version] [--profile]

[--debug]

fasta cmp.h5 [cmp.h5 ...]

Extract unmapped subreads from a fasta file.

positional arguments:

fasta

a fasta file containing all subreads.

cmp.h5

input cmp.h5 files.

optional arguments:

-h, --help

show this help message and exit

--verbose, -v

Set the verbosity level (default: None)

--version

show program's version number and exit

--profile

Print runtime profile at exit (default: False)

--debug

Catch exceptions in debugger (requires ipdb) (default: False)