fasta2DAM(1) build a Dazzler map database from fasta files


fasta2DAM [-v] path:dam ( -ffile | input:fasta ... )


Builds a map DB or DAM from the list of .fasta files following the map database name argument, or if the -f option is used, the list of .fasta files in file. Any .fasta entry that has a run of N's in it will be split into separate "contig" entries and the interval of the contig in the original entry recorded. The header for each .fasta entry is saved with the contigs created from it.