mia-2dtrackpixelmovement(1) Track positions in 2D

SYNOPSIS

mia-2dtrackpixelmovement -i <in-file> -o <out-file> -t <transformation> [options]

DESCRIPTION

mia-2dtrackpixelmovement Track the position of a pixel by means of a transformation obtained by using image registration. The pixel data is given in CSV format
   id;time;x;y;z;reserved

The fields 'time', 'x', 'y', and 'z' are updated, and the fields 'id' and 'reserved' are preserved, empty lines are ignored.

OPTIONS

File-IO

-i --in-file=(input, required); string
input point set
-o --out-file=(output, required); string
output point set
-t --transformation=(input, required); io
transformation describing the monitored change For supported file types see PLUGINS:2dtransform/io

Parameters

-T --time-step=1
time step to use for the position updatetime step to use for the position update

Help & Info

-V --verbose=warning
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
info - Low level messages
trace - Function call trace
fail - Report test failures
warning - Warnings
error - Report errors
debug - Debug output
message - Normal messages
fatal - Report only fatal errors
--copyright
print copyright information
-h --help
print this help
-? --usage
print a short help
--version
print the version number and exit

Processing

--threads=-1
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).

PLUGINS: 2dtransform/io

bbs
Binary (non-portable) serialized IO of 2D transformations

Recognized file extensions: .bbs

 
datapool
Virtual IO to and from the internal data pool

Recognized file extensions: [email protected]

 
vista
Vista storage of 2D transformations

Recognized file extensions: .v2dt

 
xml
XML serialized IO of 2D transformations

Recognized file extensions: .x2dt

 

EXAMPLE

This program evaluated the changed position of pixels given in input.csv, by using a time step of 2.0 time units and the transformation change.v2df, and writes the updated positions to updated.csv.
mia-2dtrackpixelmovement -i input.csv -o output.cvs --time-step 2.0 --transformation change.v2df

AUTHOR(s)

Gert Wollny

COPYRIGHT

This software is Copyright (c) 1999-2015 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.