pmrna(1)
filter out all but the primary isoform from each gene of the input
SYNOPSIS
pmrna
[,options/] ,< annot.gff3 > new.gff3/
DESCRIPTION
Options:
- -h|--help
-
print this help message and exit
- -i|--introns
-
flag indicating that introns are declared explicitly
and do not need to be inferred from exon features;
default is to infer introns
- -l|--locus
-
report a single representative mRNA for each locus
instead of each gene
- -m|--map: FILE
-
write each gene/mRNA mapping to the specified file
- -p|--pseudogenes
-
disable pseudogene detection and correction
