slice_fasta_gff(1) Slice subsequences from an input FASTA file


slice_fasta [,options/] ,<FASTA file> <GFF file>/


slice_fasta from FSA 1.15.9


-t, --type <string>
only look at features of particular type

Slice subsequences from an input FASTA file. Assumes 1-based, fully-closed coordinates. If no strand information is available, then the + strand is assumed. If the - strand is requested, then the subsequence is pulled out and then reverse-complemented.

Assumes a DNA alphabet.


This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.