Bio::Map::LinkagePosition(3) Create a Position for a Marker that will be placed


use Bio::Map::Position;
my $position = Bio::Map::LinkagePosition->new(-positions => 1,
-distance => 22.1 );
# can get listing of positions
my @positions = $position->each_position;


Position for a Bio::Map::MarkerI compliant object that will be placed on a Bio::Map::LinkageMap. See Bio::Map::MarkerI and Bio::Map::LinkageMap for details


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AUTHOR - Chad Matsalla

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Lincoln Stein, [email protected] Heikki Lehvaslaiho, heikki-at-bioperl-dot-org Jason Stajich [email protected] Sendu Bala [email protected]


The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _


 Title   : new
 Usage   : my $obj = Bio::Map::LinkagePosition->new(-positions => $position,
                                                                   -distance => $distance);
 Function: Builds a new Bio::Map::LinkagePosition object
 Returns : Bio::Map::LinkagePosition
 Args    : -order => the relative order of this marker on a linkage map
               -positions => positions on a map

Bio::Map::PositionI methods


 Title   : order
 Usage   : $o_position->order($order)
           my $order = $o_position->order()
 Function: get/set the order position of this position in a map
 Returns : int
 Args    : none to get, int to set