bp_seqretsplit(1) split a sequence (or stream) into a single file per sequence


bp_seqretsplit file1 file2 ..
# or
bp_seqretsplit < file1


The script will split all sequences from fasta file(s) (or stdin) to individual files. The filename is the sequence ID (everything before the 1st whitespace in a FASTA header). Currently it doesn't check to see that it isn't overwriting an existing file so IDs should be unique

This is inspired by EMBOSS seqretsplit tool.


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Jason Stajich <jason_AT_bioperl_DOT_org>