man edamhasoutput (1): Find EDAM ontology terms by has

SYNOPSIS

edamhasoutput -identifier string [-namespace list] -sensitive boolean -subclasses boolean -obsolete boolean -edamhasoutput outobo
edamhasoutput -help

DESCRIPTION

edamhasoutput

is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). It is part of the "Ontology:EDAM,Data retrieval:Ontology data" command group(s).

OPTIONS

Input section

-identifier string

Additional section

-namespace list

: By default all terms are returned. Searches can be limited to one or a few namespaces. Default value: *

Advanced section

-sensitive boolean

: By default, the query keywords are matched against the EDAM term names (and synonyms) only. This option also matches the keywords against the EDAM term definitions and will therefore (typically) report more matches. Default value: N

-subclasses boolean

: Extend the query matches to include all terms which are specialisations (EDAM sub-classes) of the matched type. Default value: N

-obsolete boolean

: The default behaviour is to not use or return obsolete terms. This option if set will include all terms. Default value: N

Output section

-edamhasoutput outobo

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

AUTHOR

Debian Med Packaging Team <[email protected]>

: Wrote the script used to autogenerate this manual page.

COPYRIGHT

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.