DESCRIPTION

usage: fastaq_deinterleave [options] <infile> <out_fwd> <out_rev>

Deinterleaves sequence file, so that reads are written alternately between two output files

positional arguments:

infile

Name of fasta/q file to be deinterleaved

out_fwd

Name of output fasta/q file of forwards reads

out_rev

Name of output fasta/q file of reverse reads

optional arguments:

-h, --help

show this help message and exit

--fasta_out

Use this to write output as fasta (default is same as input)