DESCRIPTION

usage: fastx_renamer [-n TYPE] [-h] [-z] [-v] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.14 by A. Gordon ([email protected])

[-n TYPE]

= rename type:

SEQ - use the nucleotides sequence as the name. COUNT - use simply counter as the name.

[-h]

= This helpful help screen.

[-z]

= Compress output with GZIP.

[-i INFILE]

= FASTA/Q input file. default is STDIN.

[-o OUTFILE] = FASTA/Q output file. default is STDOUT.