DESCRIPTION
Post filtering of significant kmers.This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).
OPTIONS
Required options:
- -k [ --kmers ] arg
- file of output from seer
Filtering options:
- --chisq arg
- minimum unadjusted p-value to output
- --pval arg
- minimum adjusted p-value to output
- --maf arg
- minimum maf/max 1-maf to output
- --beta arg
- minimum |beta| to output
- --substr
- remove smaller kmers completely represented elsewhere
- --pos_beta
- output positive effect sizes only
Other options:
- -s [ --sort ] arg
- field to sort on: chisq, pval, maf or beta
- -h [ --help ]
- full help message
AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.