SYNOPSIS
gt compreads decompress [option ...] (-file file)
DESCRIPTION
-v [yes|no]
- be verbose (default: no)
-descs [yes|no]
- enable description decoding (default: no)
-file [string]
- specify base name of files containing HCR. (default: undefined)
-name [string]
- specify base name for decoded hcr (suffix will be ".fastq") (default: undefined)
-smap [string]
- specify file containing alphabetdescription (file must be an .al1 file). If "-smap" is not set, dna alphabet is used. (default: undefined)
-range [start end]
- decode multiple consecutive reads. If range is not specified, the entire file will be decoded. (default: undefined)
-width [value]
- set width of output, 0 disables formatting. line breaks in quality strings can cause problems with parsers, use with care (default: 0)
-help
- display help and exit
-version
- display version information and exit