SYNOPSIS

Honey {subcommand}[options]

DESCRIPTION

PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.

OPTIONS

For a complete description, see the help menu

-h, --help

Show summary of options.