SYNOPSIS
mia-meshdistance-to-stackmask -i <in-mesh> -r <ref-mask> -o <out-mesh> [options]DESCRIPTION
mia-meshdistance-to-stackmask This program takes a binary masks and a triangular mesh as input and evaluates the distance of the mesh vertices to the binary maskand stores the result in a new mesh.OPTIONS
-
- -i --in-mesh=(input, required); io
- input mesh For supported file types see PLUGINS:mesh/io
- -r --ref-mask=(input, required); io
- reference binary mask For supported file types see PLUGINS:2dimage/io
- -o --out-mesh=(output, required); io
- output mesh For supported file types see PLUGINS:mesh/io
Help & Info
-
- -V --verbose=warning
-
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
- info - Low level messages
- trace - Function call trace
- fail - Report test failures
- warning - Warnings
- error - Report errors
- debug - Debug output
- message - Normal messages
- fatal - Report only fatal errors
- --copyright
- print copyright information
- -h --help
- print this help
- -? --usage
- print a short help
- --version
- print the version number and exit
Processing
-
- --threads=-1
- Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
PLUGINS: 2dimage/io
- bmp
- BMP 2D-image input/output support
- Recognized file extensions: .BMP, .bmp
-
Supported element types:
- binary data, unsigned 8 bit, unsigned 16 bit
- datapool
- Virtual IO to and from the internal data pool
- Recognized file extensions: [email protected]
- dicom
- 2D image io for DICOM
- Recognized file extensions: .DCM, .dcm
-
Supported element types:
- signed 16 bit, unsigned 16 bit
- exr
- a 2dimage io plugin for OpenEXR images
- Recognized file extensions: .EXR, .exr
-
Supported element types:
- unsigned 32 bit, floating point 32 bit
- jpg
- a 2dimage io plugin for jpeg gray scale images
- Recognized file extensions: .JPEG, .JPG, .jpeg, .jpg
-
Supported element types:
- unsigned 8 bit
- png
- a 2dimage io plugin for png images
- Recognized file extensions: .PNG, .png
-
Supported element types:
- binary data, unsigned 8 bit, unsigned 16 bit
- raw
- RAW 2D-image output support
- Recognized file extensions: .RAW, .raw
-
Supported element types:
- binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
- tif
- TIFF 2D-image input/output support
- Recognized file extensions: .TIF, .TIFF, .tif, .tiff
-
Supported element types:
- binary data, unsigned 8 bit, unsigned 16 bit, unsigned 32 bit
- vista
- a 2dimage io plugin for vista images
- Recognized file extensions: .V, .VISTA, .v, .vista
-
Supported element types:
- binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
PLUGINS: mesh/io
- datapool
- Virtual IO to and from the internal data pool
- Recognized file extensions: [email protected]
- off
- plugin to load/store some Geomview OFF Files
- Recognized file extensions: .OFF, .off
- ply
- Ply triangle mesh input/output support
- Recognized file extensions: .PLY, .ply
- stl
- STL mesh io plugin
- Recognized file extensions: .STL, .stl
- vista
- Vista/Simbio triangle mesh input/output support
- Recognized file extensions: .V, .VMESH, .v, .vmesh
- vtk
- A subset of VTK mesh in-and output: Triangle meshes are written, and triangle meshes and triangle strips are read. Additional per-vertex attributes are supported: 'normals', 'colors' for three component colors, and 'scale' for a scalar value attached to each vertex. The data is written by the vtkPolyDataWriter in binary format.
- Recognized file extensions: .VTK, .VTKMESH, .vtk, .vtkmesh
EXAMPLE
Evaluate the distance of the mask given in the images maskXXXX.png to the mesh given in mesh.v and save the result to mesh-dist.v- mia-meshdistance-to-stackmask -i mesh.v -r maskXXXX.png -o mesh-dist.v
AUTHOR(s)
Gert WollnyCOPYRIGHT
This software is Copyright (c) 1999-2015 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.