ontocount(1) Count ontology term(s)


ontocount -oboterms obo -subclasses boolean -obsolete boolean -outfile outfile
ontocount -help



is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). It is part of the "Ontology" command group(s).


Input section

-oboterms obo

Additional section

Advanced section

-subclasses boolean

Extend the query matches to include all terms which are specialisations (sub-classes) of the matched terms. Default value: N

-obsolete boolean

The default behaviour is to not use or return obsolete terms. This option if set will include all terms. Default value: N

Output section

-outfile outfile

Default value: stdout


Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).


Debian Med Packaging Team <[email protected]>

Wrote the script used to autogenerate this manual page.


This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.