RG::Utils::Copf(3)
Rost Lab perl utilities
SYNOPSIS
use RG::Utils::Copf;
FUNCTIONS
See module source for description.
- amino_acid_convert_3_to_1
-
- amino_acid_convert_3_to_1_ini
-
- brIniErr
-
- brIniGetArg
-
- brIniHelp
-
- brIniHelpLoop
-
- brIniHelpRdItself
-
- brIniRdDef
-
- brIniSet
-
- brIniWrt
-
- bynumber
-
- bynumber_high2low
-
- cleanUp
-
- complete_dir
-
- completeDir
-
- convAliGen
-
- convDsspGen
-
- convFastamul2many
-
- convFssp2Daf
-
- convFsspGen
-
- convGcg2fasta
-
- convHssp2seq
-
- convHsspGen
-
- convMsf2saf
-
- convPdb2seq
-
- convPdbGen
-
- convPhd2dssp
-
- convPhd2seq
-
- convPhdGen
-
- convPir2fasta
-
- convPirmulGen
-
- convSaf2many
-
- convSeq2fastaPerl
-
- convSeq2seq
-
- convSeq2seqOld
-
- convSeqGen
-
- convSwiss2fasta
-
- copf
-
- dsspGetChain
-
- dsspRdSeq
-
- dsspWrtFromPhd
-
- errSbr
-
- errSbrMsg
-
- fastaRdGuide
-
- fastaRdMul
-
- fastaWrt
-
- fastaWrtMul
-
- fctRunTimeLeft
-
- fctSeconds2time
-
- gcgRd
-
- gcgWrt
-
- getDistanceNewCurveIde
-
- getFileFormatQuick
-
- get_in_keyboard
-
- get_range
-
- get_rangeHyphen
-
- getSysARCH
-
- hsspCorrectNali
-
- hsspGetChain
-
- hsspGetChainLength
-
- hsspRdAli
-
- hsspRdHeader
-
- hsspRdSeqSecAccOneLine
-
- ini
-
- iniDef
-
- iniHelpLoc
-
- is_chain
-
- isDaf
-
- is_dssp
-
- isFasta
-
- isFastaMul
-
- is_fssp
-
- isGcg
-
- is_hssp
-
- isMsf
-
- isPdb
-
- is_pdbid
-
- isPhdAcc
-
- isPhdBoth
-
- isPhdHtm
-
- isPhdSec
-
- isPir
-
- isPirMul
-
- is_ppcol
-
- isRdb
-
- is_rdb_htmref
-
- is_rdb_htmtop
-
- is_rdb_nnDb
-
- isSaf
-
- is_strip
-
- isSwiss
-
- msfBlowUp
-
- msfCheckFormat
-
- msfCompress
-
- msfCountNali
-
- msfRd
-
- msfShorten
-
- msfWrt
-
- open_file
-
- pdbExtrSequence
-
- pirRdMul
-
- pirWrtMul
-
- pirWrtOne
-
- rdRdbAssociative
-
- rdRdbAssociativeNum
-
- safCompress
-
- safRd
-
- safWrt
-
- seqGenWrt
-
- swissRdSeq
-
- sysDate
-
- sysGetUserLoc
-
- sysRunProg
-
- wrtLoc
-
VARIABLES
