DESCRIPTIONTFBS::PatternGen::Gibbs::Motif is used to store and manipulate unprocessed motifs and associated numerical scores created by the Gibbs program. You do not normally want to create a TFBS::PatternGen::Gibbs::Motif yourself. They are created by running TFBS::PatternGen::Gibbs
FEEDBACKPlease send bug reports and other comments to the author.
AUTHOR - Boris Lenhard and Wynand AlkemaBoris Lenhard <Boris.Lenh[email protected]> Wynand Alkema <[email protected]>
APPENDIXThe rest of the documentation details each of the object methods. Internal methods are preceded with an underscore.
Title : MAP Usage : my $map_score = $motif->MAP; Function: returns MAP score for the detected motif (This is a backward compatibility method. For consistency, you should use $motif->tag('MAP_score') instead Returns : float (a scalar) Args : none
Other methodsTFBS::PatterGen::Motif::Gibbs inherits from TFBS::PatternGen::Motif, which inherits from TFBS::Matrix. Please consult the documentation of those modules for additional available methods.