SYNOPSIS
average_affine [options] x0 [x1 ...]WHERE x0 ... xN is [{-i,--inverse}] affine transformation #. (If the first transformation in the sequence is inverted, then '--inverse' must be preceded by '--', i.e., use '-- --inverse xform.path').
DESCRIPTION
This tool computes the average of a sequence of user-provided affine coordinate transformations.OPTIONS
Global Toolkit Options (these are shared by all CMTK tools)
- --help
- Write list of basic command line options to standard output.
- --help-all
- Write complete list of basic and advanced command line options to standard output.
- --wiki
- Write list of command line options to standard output in MediaWiki markup.
- --man
- Write man page source in 'nroff' markup to standard output.
- --version
- Write toolkit version to standard output.
- --echo
- Write the current command line to standard output.
- --verbose-level <integer>
- Set verbosity level.
- --verbose, -v
- Increment verbosity level by 1 (deprecated; supported for backward compatibility).
- --threads <integer>
- Set maximum number of parallel threads (for POSIX threads and OpenMP).
Main Options
- --include-reference, -r
- Include reference coordinate system in averaging.
- --outfile <string>, -o <string>
- Output transformation. [Default: average.xform]
- --append, -a
- Append to output file [default: overwrite].
- --invert-output, -I
- Invert averaged transformation before output [default: no].
AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav HalchenkoBUGS
Report bugs at http://nitrc.org/projects/cmtk/ACKNOWLEDGMENTS
CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.