VERSION

version 3.6.3

SYNOPSIS

Take in multi-FASTA files of nucleotides and align each file with PRANK or MAFFT

use Bio::Roary::External::GeneAlignmentFromNucleotides;

my $seg = Bio::Roary::External::GeneAlignmentFromNucleotides->new(
fasta_files => [],
);

$seg->run();

METHODS

output_file

Returns the path to the results file

AUTHOR

Andrew J. Page <[email protected]>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007