VERSION

version 3.6.3

SYNOPSIS

Take in a fasta file and create a temporary blast database.

use Bio::Roary::External::Makeblastdb;

my $blast_database= Bio::Roary::External::Makeblastdb->new(
fasta_file => 'contigs.fa',
exec => 'makeblastdb'
);

$blast_database->run();

METHODS

output_database

Returns the path to the temporary blast database files

AUTHOR

Andrew J. Page <[email protected]>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007