SYNOPSIS
checkTargetSortedness infile.bam
OPTIONS
'infile.bam' is the name of the BAM file to check for sortedness. The program will output a short message describing the sortedness status of the file.
AUTHORS
AUGUSTUS was written by M. Stanke, O. Keller, S. König, L. Gerischer and L. Romoth.
ADDITIONAL DOCUMENTATION
An exhaustive documentation can be found in the file /usr/share/augustus/README.TXT.