convert_seq(1) conversion of sequence and alignment formats


convert_seq [OPTION]


convert_seq is used for sequence and alignment format conversion. Instead of using command line arguments it starts a conversation with the user where the desired function can be invoked by answering questions.

This program is used by the prof(1) secondary structure, accessibility and transmembrane helix predictor from Burkhard Rost.


None. Answer questions printed on STDOUT by typing your choice into STDIN.


Reinhard Schneider Mar, 1991 version 1.0 LION http://www.lion-ag/ Heidelberg
Ulrike Goebel Mar, 1997 version 1.1 LION http://www.lion-ag/ Heidelberg
Reinhard Schneider Mar, 1997 version 2.0 LION http://www.lion-ag/ Heidelberg
Burkhard Rost May, 1998 version 2.1 EMBL/LION Heidelberg
Burkhard Rost         Oct, 1998 version 2.2

Laszlo Kajan <[email protected]> TU Muenchen, Germany
Guy Yachdav <[email protected]> CUBIC (Columbia University, NY, USA), Technical University Munich (Munich, DE), BioSof LLC (USA)