gccalc [-f/--format FORMAT] [-h/--help] filename
gccalc [-f/--format FORMAT] < filename
gccalc [-f/--format FORMAT] -i filename
DESCRIPTIONThis scripts prints out the GC content for every nucleotide sequence from the input file.
OPTIONSThe default sequence format is fasta.
The sequence input can be provided using any of the three methods:
- unnamed argument
- named argument
gccalc -i filename
- standard input
gccalc < filename
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AUTHOR - Jason StajichEmail [email protected]
HISTORYBased on script code (see bottom) submitted by [email protected]
Submitted as part of bioperl script project 2001/08/06