SYNOPSIS
gt compreads refdecompress [option ...] (-file file)
DESCRIPTION
-v [yes|no]
- be verbose (default: no)
-qnames [yes|no]
- decode read names, default is to just number them (default: no)
-ref [string]
- Index file (generated by the gt encseq tool) for reference genome. (default: undefined)
-rcr [string]
- specify base name of file containing RCR. (default: undefined)
-name [string]
- specify base name for decoded RCR (suffix will be ".rcr.decoded") (default: undefined)
-help
- display help and exit
-version
- display version information and exit