SYNOPSIS

kmc_tools dump [dump_params] <inputdb> [input_params] <output>

DESCRIPTION

This command produces a text dump of the KMC database.

OPTIONS

For each input there are additional parameters:

-ci<value>

exclude k-mers occurring less than <value> times

-cx<value>

exclude k-mers occurring more of than <value> times

Dump operation parameters:

-s

sorted output

EXAMPLE

kmc_tools dump wy_kmc2 -ci3 -cx1000 dump.txt

AUTHOR

KMC was originally written by:

• Sebastian Deorowicz (

• Marek Kokot

• Szymon Grabowski

• Agnieszka Debudaj-Grabysz

COPYING

KMC is a free software distributed under GNU GPL3 licence for academic, research, and commercial use.