mia-2dmyoseries-compdice(1) Evaluate the dice index between segmentations.

SYNOPSIS

mia-2dmyoseries-compdice -1 <first> -2 <second> [options]

DESCRIPTION

mia-2dmyoseries-compdice This program is used to evaluate the per-frame dice index of segmented regions of two image series

OPTIONS

-1 --first=(input, required); string
first segmentation set
-2 --second=(input, required); string
second segmentation set
-k --skip=2
images to skip atthe begin of the seriesimages to skip atthe begin of the series

Help & Info

-V --verbose=warning
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
info - Low level messages
trace - Function call trace
fail - Report test failures
warning - Warnings
error - Report errors
debug - Debug output
message - Normal messages
fatal - Report only fatal errors
--copyright
print copyright information
-h --help
print this help
-? --usage
print a short help
--version
print the version number and exit

Processing

--threads=-1
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).

EXAMPLE

Evaluate the per-frame dice index of the segmentations of set segment.set with respect to the segmentation set reference.set skipping two images at the beginning.
mia-2dmyoseries-compdice -i segment.set -r reference.set -k 2

AUTHOR(s)

Gert Wollny

COPYRIGHT

This software is Copyright (c) 1999-2015 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.