SYNOPSIS
PicardCommandLine COMMAND [OPTION]...DESCRIPTION
SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence alignments.Picard Tools includes lots of utilities to manipulate SAM and BAM files. The whole list with a short description can be obtained by running PicardCommandLine -h.
Description of the options and parameters of all commands can be obtained by running PicardCommandLine COMMAND -h.