psw(1) Protein Smith-Waterman and other comparisons


psw [options ... ] { seq1 seq2 }


psw is a short and sweet program for calculating smith waterman alginments quickly. It was mainly written as C driver to test the underlying code which is more useful in things like the Perl port.


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This manual page was written by Philipp Benner [email protected] for the Debian system (but may be used by others). Permission is granted to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2 any later version published by the Free Software Foundation.

On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL.