SYNOPSIS
srf2fasta [-C] srf_archive
DESCRIPTION
srf2fasta extracts sequences from an SRF archive and writes them in fasta format to stdout.
OPTIONS
- -C
-
Masks out sequences tagged as bad quality.
EXAMPLES
To extract only the good quality sequences from runX.srf into runX.fasta.
srf2fasta -C runX.srf > runX.fasta
AUTHOR
James Bonfield, Wellcome Trust Sanger Institute